Still think there's no chemistry between them? Here's another person who noticed that Harry and Hermione were very close, a little too close:

Harry has at last found love at Hogwarts. His close friend, Colin Creevey, says that Harry is rarely seen out of the company of one Hermione Granger, a stunningly pretty Muggle-born girl who, like Harry, is one of the top students in the school.

So Colin Creevey noticed how much time they spend together, but I just can't believe that's the only thing making him believe they're in love! There has to be some noticeable chemistry between them to come to this conclusion.

I know it's Rita Skeeter assuming that H/Hr are so close only because they're dating, but Colin probably told her more than it's written here. Would Rita believe Colin that Harry and Hermione are boyfriend and girlfriend merely because he said they hang out often? I don't think so. I think Colin elaborated on his suspicions of H/Hr. But maybe it was just one of Rita Skeeter's exaggerations. Either way, there's more proof of their chemistry:

"Are you going to tell us — ?"

Hermione shook her head warningly and glanced at Mrs. Weasley.

"Hello, Hermione," said Mrs. Weasley, much more stiffly than usual.

"Hello," said Hermione, her smile faltering at the cold expression on Mrs. Weasley's face.

Harry looked between them, then said, "Mrs. Weasley, you didn't believe that rubbish Rita Skeeter wrote in Witch Weekly, did you? Because Hermione's not my girlfriend."

"Oh!" said Mrs. Weasley. "No — of course I didn't!"

But she became considerably warmer toward Hermione after that.

So even Molly believed that Harry and Hermione were boyfriend and girlfriend (and Hermione had 'broken Harry's heart')? Come on, their chemistry was so noticeable that even Molly thought it was believable enough. ...Although Molly does believe everything that newspapers and magazines say. And maybe she didn't know them well enough because she assumed Hermione could break Harry's heart.

Still don't believe that Harry and Hermione had lots of chemistry in the books? Maybe you're right, we need to actually see the chemistry, not just have others notice it. And guess what? We do get to see their chemistry. This often happens when Ron becomes suspicious of a possible H/Hr relationship. Ron, their closest friend who knows basically everything about them, suspects that Harry and Hermione are secretly in love. And he is quite rightly suspicious of them when we have moments like these demonstrating their perfect chemistry in the books:

"We'll go down after Quidditch," Harry assured her. He too was missing Hagrid, although like Ron he thought that they were better off without Grawp in their lives. "But trials might take all morning, the number of people who have applied." He felt slightly nervous at confronting the first hurdle of his Captaincy. "I dunno why the team's this popular all of a sudden."

"Oh, come on, Harry," said Hermione, suddenly impatient. "It's not Quidditch that's popular, it's you! You've never been more interesting, and frankly, you've never been more fanciable."

Ron gagged on a large piece of kipper. Hermione spared him one look of disdain before turning back to Harry.

"Everyone knows you've been telling the truth now, don't they? The whole Wizarding world has had to admit that you were right about Voldemort being back and that you really have fought him twice in the last two years and escaped both times. And now they're calling you 'the Chosen One' — well, come on, can't you see why people are fascinated by you?"

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